| # | Lag | K | V | T | +/- | P |
|---|---|---|---|---|---|---|
| 1 | Dynamo Dresden | 28 | 15 | 6 | 23 | 52 |
| 2 | FC Saarbrücken | 28 | 14 | 6 | 12 | 50 |
| 3 | Energie Cottbus | 28 | 14 | 7 | 18 | 49 |
| 4 | Arminia Bielefeld | 28 | 13 | 8 | 13 | 46 |
| 5 | Hansa Rostock | 27 | 13 | 9 | 6 | 44 |
| 6 | FC Viktoria Köln | 28 | 13 | 11 | 7 | 43 |
| 7 | Verl | 28 | 11 | 7 | 4 | 43 |
| 8 | FC Ingolstadt 04 | 28 | 11 | 8 | 7 | 42 |
| 9 | SV Wehen | 28 | 11 | 9 | -1 | 41 |
| 10 | FC Erzgebirge Aue | 28 | 12 | 12 | -5 | 40 |
| 11 | Rot Weiss Essen | 28 | 10 | 12 | -3 | 36 |
| 12 | TSV 1860 München | 28 | 10 | 12 | -11 | 36 |
| 13 | Osnabrück | 28 | 9 | 11 | -6 | 35 |
| 14 | Borussia Dortmund II | 28 | 9 | 12 | -2 | 34 |
| 15 | Alemannia Aachen | 28 | 7 | 8 | -3 | 34 |
| 16 | Waldhof Mannheim | 28 | 8 | 11 | 0 | 33 |
| 17 | SV Sandhausen | 28 | 8 | 12 | -4 | 32 |
| 18 | Stuttgart II | 28 | 8 | 13 | -13 | 31 |
| 19 | Hannover 96 II | 28 | 6 | 17 | -22 | 23 |
| 20 | SpVgg Unterhaching | 27 | 3 | 14 | -20 | 19 |
K = Kamper
V = Vunnet
T = Tapet
+/- = Målforskjell
P = Poeng